Code breaking changes in ‘tidyr’ 1.0.0

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Three of my packages needed updates due to code-breaking changes introduced in ‘tidyr’ 1.0.0, an update which will soon be submitted to CRAN by its authors. I received warning e-mails only about ‘photobiologyInOut’, which I have updated and submitted to CRAN some time ago. More recently I have noticed that ‘ggspectra’ had also to be updated and this required an update to ‘photobiology’. ‘ggspectra’  0.3.4 is ready to be submitted to CRAN as soon as ‘photobiology’ 0.9.29 is built on CRAN servers.

If you have been using ‘tidyr’ in your scripts, you may need to update them. The required edits are rather small but can come as a surprise, which is why I am writing this post.

photobiology 0.9.29

Package update / R packagesLeave a comment

Changes from version 0.9.28 the most recent CRAN release, are:

  • Add clean.object_spct(), na.rm.object_spct() and na.omit.object_spct() methods, which were missing and needed for updating package ‘ggspectra’.
  • Correct small off-range error in Ler_leaf.spct data:Tfr + Rfr = 1.0028 in the worse case instead of Tfr + Rfr <= 1.

Documentation web site at http://docs.r4photobiology.info/photobiology/ includes all help pages, with output from all examples, and vignettes in HTML format.
NOTE: The updated package is in CRAN.

Please raise issues concerning bugs or enhancements to this package through Bitbucket https://bitbucket.org/aphalo/photobiology/issues

Tidy time series: ‘tsibble’ and ‘feasts’

R packagesLeave a comment

This post is not to announce something related to my own packages, but to highlight Rob Hyndman’s new packages for working with time-series data using a tidy approach. If you have to deal with time series in R, you should have a look at these packages and read the posts with examples of their use at the Hyndsight blog.

I suspect more is to come soon, but for the time being have a look at what Rob Hyndman wrote yesterday and today in his blog.

 

photobiologyInOut 0.4.21

Package update / R packagesLeave a comment

The main changes from version 0.4.20 the previous CRAN release, are:

  • Track changes in ‘tidyr’ (= 1.0.0).
  • Move packages ‘hyperSpec’ and ‘pavo’ from imports to suggests.

Documentation web site at http://docs.r4photobiology.info/photobiologyinout/.

NOTE: This version of the package is in CRAN.

Please raise issues concerning bugs or enhancements to this package through Bitbucket at https://bitbucket.org/aphalo/photobiologyinout/issues