photobiology 0.9.20.9001

The main changes from version 0.9.20, the most recent CRAN release, are:

  • Handle gracefully attempts to apply smooth_spct() method to spectra containing NAs. (Warn and return as is.)
  • Add parameter na.rm to peaks(), valleys() and related methods and functions.
  • Add parameter na.rm to normalize() methods.
  • Option "photobiology.verbose" is initialized to the value of option "verbose" at the time the package is attached, making ‘photobiology’ obey the --verbose command line switch of R.
  • If photobiology.verbose == TRUE, starting from this version the presence of NAs in spectral data triggers warnings.

Documentation web site at http://docs.r4photobiology.info/photobiology/ includes all help pages, with output from all examples, and vignettes in HTML format.
NOTE: The updated package can be installed from the CRAN-like repository at https://r.r4ohotobiology.info.

Please raise issues concerning bugs or enhancements to this package through Bitbucket https://bitbucket.org/aphalo/photobiology/issues

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